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Data & Analytics

20 of 509

neuropixels-analysisaipoch-medical-research-skills

End-to-end Neuropixels extracellular electrophysiology analysis (SpikeGLX/Open Ephys/NWB) including preprocessing, motion correction, Kilosort4 spike sorting, QC metrics, and...

Data & Analytics
2K
neurokit2aipoch-medical-research-skills

Comprehensive biosignal processing for ECG/PPG/EEG/EDA/RSP/EMG/EOG; use when you need to clean, segment, and extract physiological features for HRV, event-related responses,...

Data & Analytics
2K
motif-logo-generatoraipoch-medical-research-skills

Generate publication-quality sequence logos for DNA or protein motifs.

Data & Analytics
2K
metagenomic-krona-chartaipoch-medical-research-skills

Analyze data with using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.

Data & Analytics
2K
metabolomics-workbench-databaseaipoch-medical-research-skills

Access NIH Metabolomics Workbench (4,200+ studies) via REST API. Query metabolites, RefMet nomenclature, MS/NMR data, m/z search, study metadata for metabolomics and biomarker...

Data & Analytics
2K
meta-sensitivity-plotaipoch-medical-research-skills

Generate leave-one-out sensitivity analysis plots for meta-analysis. Input is a CSV file containing meta-analysis data; outputs are a sensitivity forest plot (PNG) and a...

Data & Analytics
2K
meta-rob2-plotaipoch-medical-research-skills

Draw ROB2 risk-of-bias plots, including a Traffic Light Plot and a Summary Bar Plot. Input is a CSV file with ROB2 assessments for each study; output are two PNG plot files.

Data & Analytics
2K
meta-radial-plotaipoch-medical-research-skills

Generate radial plots (Radial Plot/Galbraith Plot) for heterogeneity analysis. Visually assess heterogeneity across studies by displaying the relationship between standardized...

Data & Analytics
2K
meta-funnel-plotaipoch-medical-research-skills

Generate Meta-analysis funnel plots and perform publication bias testing. Takes CSV file with Meta-analysis data as input, outputs funnel plot PNG, Egger test and Begg test...

Data & Analytics
2K
meta-forest-model-plotaipoch-medical-research-skills

Generate forest plots for meta-analysis of survival data. Input is a CSV file containing study names, HR and 95% confidence intervals, output forest plot PNG and data table CSV....

Data & Analytics
2K
meta-forest-continuous-plotaipoch-medical-research-skills

Generate forest plots for meta-analysis of continuous data. Input a CSV file containing study names, means, standard deviations, and sample sizes for experimental and control...

Data & Analytics
2K
meta-forest-binary-plotaipoch-medical-research-skills

Generate meta-analysis forest plots for binary classification data. Input is a CSV file containing study names, event counts and sample sizes for experimental and control groups....

Data & Analytics
2K
meta-baujat-plotaipoch-medical-research-skills

Generate Baujat plots for heterogeneity analysis. Identify studies that contribute most to the overall meta-analysis results and heterogeneity, helping discover potential outlier...

Data & Analytics
2K
meta-analysisaipoch-medical-research-skills

> **Source**: Meta-Analysis Quantitative synthesis of results from multiple studies. Calculates pooled effect sizes, assesses heterogeneity, detects publication bias, and generates forest and funnel plots. When to Use "Combine these study results into a meta-analysis" "Calculate...

Data & Analytics
2K
mechanism-flowchartaipoch-medical-research-skills

Generates Mermaid flowchart code and visual diagrams for pathophysiological.

Data & Analytics
2K
matplotlibaipoch-medical-research-skills

A low-level plotting library for comprehensive customization. Use when fine-grained control over every plot element is needed, creating new types of charts, or integrating into...

Data & Analytics
2K
matchmsaipoch-medical-research-skills

Process, clean, and compare mass spectrometry (MS/MS) spectra with Matchms; use when you need reproducible spectral filtering and similarity scoring for metabolomics workflows.

Data & Analytics
2K
lipinski-rule-filteraipoch-medical-research-skills

Filter compound libraries based on Lipinski's Rule of Five for drug-likeness.

Data & Analytics
2K
lamindbaipoch-medical-research-skills

This skill is applicable when using LaminDB. LaminDB is an open-source data framework for biology that makes data queryable, traceable, reproducible, and FAIR-compliant. It is...

Data & Analytics
2K
heatmap-beautifieraipoch-medical-research-skills

Professional beautification tool for gene expression heatmaps, automatically adds clustering trees, color annotation tracks, and intelligently optimizes label layout.

Data & Analytics
2K